Neurocutaneous Syndromes (Phakomatoses)

Written & medically reviewed by the Kinase Medical Team · Last reviewed

Quick Answer

Neurocutaneous syndromes pair skin signs with nervous-system tumours or malformations. NF1 (chromosome 17) gives café-au-lait macules, freckling and neurofibromas; NF2 (chromosome 22) gives bilateral vestibular schwannomas; tuberous sclerosis (TSC1/TSC2) gives ash-leaf macules and SEGA; Sturge-Weber gives a port-wine stain with tram-track calcification; VHL (3p25) gives haemangioblastomas.

What are neurocutaneous syndromes and how are they compared?

The phakomatoses are disorders in which the skin, eye and nervous system are affected together, because these tissues share developmental pathways. Most are tumour-predisposition syndromes: a germline variant in a tumour-suppressor gene leaves every cell with one working copy, and a second hit produces hamartomas or tumours. Sturge-Weber syndrome is the exception — it is a sporadic vascular malformation caused by a mosaic somatic variant, not an inherited disorder.

Genes, inheritance and signature features
SyndromeGene and locusProteinInheritanceSignature lesion
NF1 (von Recklinghausen)NF1, chromosome 17NeurofibrominAutosomal dominantCafé-au-lait macules, neurofibromas, Lisch nodules
NF2-related schwannomatosisNF2, 22q12.2MerlinAutosomal dominantBilateral vestibular schwannomas
Tuberous sclerosis complexTSC1 (9q34) or TSC2 (16p13.3)Hamartin or tuberinAutosomal dominant; most cases sporadicAsh-leaf macules, angiofibromas, SEGA
Sturge-Weber syndromeGNAQ, 9q21 (somatic mosaic)Gαq subunitSporadic, not inheritedPort-wine birthmark, leptomeningeal angioma
Von Hippel-LindauVHL, 3p25.3VHL tumour suppressorAutosomal dominantHaemangioblastomas, clear cell renal carcinoma
NF1 (Neurofibromatosis Type 1)A children's hospital overview of NF1 — skin findings, tumours and how affected children are followed up.Video: Seattle Children's · 9:04 · Watch on YouTube · Loads from YouTube (privacy-enhanced mode) only when you press play.

What are the diagnostic criteria for NF1?

Neurofibromatosis type 1 is the most common of the hamartoma-neoplastic syndromes and is autosomal dominant: an affected parent has a 50% chance of passing it to each child. The NF1 gene on chromosome 17 encodes neurofibromin, a GTPase-activating protein that normally inhibits the RAS pathway. Neurofibromas develop when both NF1 alleles are lost in Schwann-lineage cells.

The revised diagnostic criteria published in 2021 require two or more of the following in a person without a parent with NF1. A child of an affected parent needs only one.

  • Six or more café-au-lait macules — over 5 mm before puberty, over 15 mm after puberty.
  • Freckling in the axillary or inguinal region (Crowe sign).
  • Two or more neurofibromas of any type, or one plexiform neurofibroma.
  • Optic pathway glioma.
  • Two or more iris Lisch nodules, or two or more choroidal abnormalities.
  • A distinctive osseous lesion — sphenoid dysplasia, bowing of the tibia or pseudarthrosis of a long bone.
  • A pathogenic NF1 variant on genetic testing.
Close-up of a grey-blue iris dotted with many small round brown raised spots.
Lisch nodules are pigmented iris hamartomas seen on slit-lamp examination. They are usually asymptomatic but count as a diagnostic criterion for NF1.Image: Dimitrios Malamos, CC BY 4.0

What are the main clinical features and complications of NF1?

Café-au-lait macules, axillary or inguinal freckling, Lisch nodules and neurofibromas are the first features to appear. Café-au-lait macules increase in size and number during the first decade. Freckling is seen in around 70% and appears 3 to 5 years after the macules. Lisch nodules are present in over 90% of affected adults. Osseous dysplasia and optic glioma usually appear between 1 and 3 years of age.

A smooth, evenly light-brown oval patch of skin beside the umbilicus.
A café-au-lait macule: a flat, uniformly pigmented patch with a smooth border. Six or more of adequate size support NF1.Image: Jyothi Idiculla, Shine Pakalomattom, Anasuya Desai, Babu Philip, CC BY 4.0
Neurofibroma types
TypeLocationSignificance
CutaneousDermal nerve terminalsCosmetic burden; increase in number and size in pregnancy
Nodular (subcutaneous)Under the skin, along nervesFirm, rubbery and may be painful
PlexiformNerve plexuses and fasciclesConsidered pathognomonic; risk of malignant transformation and compression

Tumour risk is increased throughout life: optic nerve glioma (about 15% of children under six with NF1), malignant peripheral nerve sheath tumour, leukaemia, gastrointestinal stromal tumour, phaeochromocytoma, breast cancer and melanoma. Selumetinib, an oral targeted drug, is approved for children aged three years and older with symptomatic plexiform neurofibromas that cannot be removed surgically.

How does NF2 differ from NF1?

NF2 — now renamed NF2-related schwannomatosis — results from pathogenic variants in the NF2 gene on 22q12.2, which encodes the tumour suppressor merlin. It was previously called MISME syndrome: multiple inherited schwannomas, meningiomas and ependymomas. Its incidence is roughly 1 in 25,000 to 1 in 40,000 live births, with nearly complete penetrance by 60 years.

NF1 versus NF2
FeatureNF1NF2
Chromosome1722
ProteinNeurofibrominMerlin
Hallmark tumourNeurofibroma (peripheral nerve)Bilateral vestibular schwannoma
Other tumoursOptic glioma, MPNST, phaeochromocytomaMeningioma, ependymoma
EyeLisch nodulesEarly posterior subcapsular or cortical cataract
Childhood presentationSkin signs dominate earlySkin tumours, cataract, mononeuropathy or spinal tumours

Symptoms usually start around 20 years of age with hearing loss, tinnitus and imbalance from vestibular schwannomas. The characteristic eye finding is early-onset posterior subcapsular or cortical cataract, present in about 67% and often appearing before neurological symptoms. Bevacizumab is the most established systemic therapy, used off-label to shrink vestibular schwannomas and preserve hearing.

What are the major features of tuberous sclerosis complex?

Tuberous sclerosis complex arises from mutations in TSC1 (9q34, hamartin) or TSC2 (16p13.3, tuberin). Loss of the inhibitory TSC protein complex allows aberrant activation of mTOR, which drives hamartomas in the brain, skin, heart, kidney and lung. Inheritance is autosomal dominant, but most cases are sporadic. About 90% have neurological symptoms — epilepsy and neurocognitive problems — and infantile spasms treated with vigabatrin are especially common.

2012 international consensus diagnostic criteria
Major featuresMinor features
Hypomelanotic macules (3 or more, at least 5 mm)Confetti skin lesions
Angiofibromas (3 or more) or fibrous cephalic plaqueDental enamel pits (more than 3)
Ungual fibromas (2 or more)Intraoral fibromas (2 or more)
Shagreen patchRetinal achromic patch
Multiple retinal hamartomasMultiple renal cysts
Cortical dysplasias, subependymal nodules, SEGANonrenal hamartomas
Cardiac rhabdomyoma, lymphangioleiomyomatosis, angiomyolipomas (2 or more)—

A definite diagnosis needs two major features, or one major plus two or more minor features. One major feature, or two minor features alone, gives a possible diagnosis.

  • Hypomelanotic (ash-leaf) macules — the most common skin sign, present in about 90%; may be present at birth and are best seen under a Wood's lamp.
  • Facial angiofibromas — in about 75%, across the cheeks and nose in a butterfly distribution, usually from 3 to 10 years; historically mislabelled adenoma sebaceum.
  • Shagreen patch — an orange-peel connective-tissue naevus, usually on the lower back, in over 50%.
  • Ungual (Koenen) fibromas — periungual growths that appear near puberty.
  • Brain — cortical tubers, subependymal nodules in 80% to 90% and subependymal giant cell astrocytoma (SEGA) in 10% to 20%.
  • Heart, kidney, lung — cardiac rhabdomyomas can be seen prenatally; renal angiomyolipomas in up to 75%; lymphangioleiomyomatosis in women around age 35.

mTOR inhibitors (everolimus, sirolimus) are used for asymptomatic SEGA and are considered first-line for renal angiomyolipoma, preferred over surgery. Angiomyolipomas larger than 3.5 cm may be embolised to avoid nephrectomy.

How does Sturge-Weber syndrome present?

Sturge-Weber syndrome combines a facial port-wine birthmark, leptomeningeal angiomatosis and ocular vascular involvement. It is sporadic and caused by a somatic mosaic GNAQ variant (most often R183Q) on chromosome 9q21. Port-wine birthmarks occur in 3 of every 1,000 births, but only a minority have brain involvement; a birthmark in the ophthalmic (V1) distribution carries a 20% to 50% risk of brain involvement.

Axial non-contrast CT of a child's brain with bright curvilinear calcification following the gyri of one frontal lobe.
Gyriform cortical and subcortical calcification on CT in Sturge-Weber syndrome. On plain skull films the same pattern gives the tram-track sign.Image: Frank Gaillard, CC BY-SA 3.0
  • Seizures — the most common presenting neurological symptom, median onset about 6 months, often becoming drug-resistant and followed by hemiparesis.
  • Stroke-like episodes, migraine-type headaches, hemiparesis and intellectual disability.
  • Glaucoma — very common and almost always ipsilateral to the birthmark; congenital in about 60% of affected patients; the risk rises when both upper and lower lids are involved.
  • Imaging — CT is best for calcification; MRI shows leptomeningeal enhancement and cortical atrophy on the side of the birthmark.

Which tumours occur in von Hippel-Lindau syndrome?

Von Hippel-Lindau syndrome is an autosomal dominant tumour syndrome caused by variants in the VHL gene at 3p25.3. About 80% inherit it from an affected parent and about 20% have a de novo variant. The exam focus is its tumour list.

Tumours in VHL
OrganLesionExam point
RetinaRetinal haemangioblastomaOften the first manifestation; can cause vision loss
Cerebellum and spinal cordHaemangioblastomaHeadache, ataxia; spinal lesions with syrinx cause pain
KidneyRenal cysts and clear cell renal cell carcinomaAbout 70% by age 60; leading cause of death
AdrenalPhaeochromocytoma, paragangliomaSustained or episodic hypertension
PancreasCysts and neuroendocrine tumoursUsually asymptomatic
Inner earEndolymphatic sac tumourHearing loss may be the presenting symptom
Von Hippel-Lindau disease (Year of the Zebra 2024)A concise animated review of VHL genetics, the HIF pathway and its tumour spectrum.Video: Osmosis from Elsevier · 5:39 · Watch on YouTube · Loads from YouTube (privacy-enhanced mode) only when you press play.

Pathogenic VHL variants fail to downregulate hypoxia-inducible factor alpha, leading to overexpression of effectors such as VEGF that drive these vascular tumours. Belzutifan, a HIF-2α inhibitor, is approved in many countries for adults with VHL-associated renal cell carcinoma, CNS haemangioblastomas or pancreatic neuroendocrine tumours not needing immediate surgery.

Where does Klippel-Trenaunay syndrome fit among the phakomatoses?

Klippel-Trenaunay syndrome (KTS) is a vascular malformation syndrome with a neurocutaneous flavour: a capillary malformation (port-wine stain), venous and lymphatic malformations and soft-tissue and bone hypertrophy of a limb, usually the lower limb. The diagnosis is clinical — at least 2 of the 3 classic findings: cutaneous capillary malformation, venous abnormality and limb hypertrophy. It is linked to somatic PIK3CA mutations and sits within the PIK3CA-related overgrowth spectrum (PROS).

  • Port-wine stain is seen in about 90–100% of cases and is usually present at birth; venous malformations (varicosities, persistent embryonic veins) in 70–100%.
  • Complications include venous stasis, recurrent deep vein thrombosis and pulmonary embolism, and gastrointestinal bleeding from colonic venous malformations.
  • Arteriovenous malformations define the distinct Parkes Weber syndrome, so the old name Klippel-Trenaunay-Weber is now avoided.
  • Do not confuse with Sturge-Weber syndrome, where the facial port-wine stain is accompanied by leptomeningeal angiomatosis and glaucoma.

Frequently asked questions

What are the 2021 diagnostic criteria for NF1?
Two or more of: six or more café-au-lait macules over 5 mm before puberty or over 15 mm after puberty; axillary or inguinal freckling; two neurofibromas or one plexiform neurofibroma; optic pathway glioma; two or more Lisch nodules or choroidal abnormalities; a distinctive bony lesion; or a pathogenic NF1 variant. A child of an affected parent needs only one.
Which chromosome is involved in NF1 and NF2?
NF1 is caused by variants in the NF1 gene on chromosome 17, which encodes neurofibromin, a RAS-inhibiting protein. NF2, now called NF2-related schwannomatosis, is caused by variants in the NF2 gene on chromosome 22 at 22q12.2, which encodes merlin. Both are autosomal dominant, but NF2 is defined by bilateral vestibular schwannomas rather than neurofibromas.
What is an ash-leaf macule?
An ash-leaf macule is an oval or leaf-shaped hypomelanotic patch seen in tuberous sclerosis complex. It is the most common skin sign, present in about 90 percent of patients, and may be visible at birth. A Wood's lamp makes faint macules easier to see. Three or more macules at least 5 mm across count as a major diagnostic feature.
What was adenoma sebaceum?
Adenoma sebaceum is the old and inaccurate name for the facial angiofibromas of tuberous sclerosis. They are pink or red papules spreading across the cheeks and nose in a butterfly pattern, usually appearing between 3 and 10 years of age. They are fibrovascular lesions, not sebaceous adenomas, which is why the old term is now avoided.
What causes the tram-track sign in Sturge-Weber syndrome?
Impaired venous drainage from the leptomeningeal angioma leads to calcification of the underlying cortex. The calcifications are gyriform, usually posterior and on the same side as the facial port-wine stain. On plain skull radiographs the parallel lines of calcified gyri resemble tram tracks. CT is the best modality for detecting the calcification.
Why is glaucoma checked in every child with Sturge-Weber syndrome?
Glaucoma is very common in Sturge-Weber syndrome and is almost always on the same side as the port-wine birthmark. It can be congenital, present at birth in about 60 percent of affected patients, or appear later in childhood. The risk rises when both upper and lower eyelids are involved, so regular intraocular pressure measurement is recommended.
What is the leading cause of death in von Hippel-Lindau syndrome?
Clear cell renal cell carcinoma, which develops in about 70 percent of people with von Hippel-Lindau syndrome by the age of 60 and is the leading cause of mortality. Patients are therefore kept under lifelong kidney imaging surveillance, alongside screening for retinal and central nervous system haemangioblastomas, phaeochromocytoma and pancreatic lesions.
How is tuberous sclerosis treated?
Treatment is directed at each manifestation. Vigabatrin is especially used for infantile spasms, and about one third of patients have drug-resistant seizures that may need surgery. mTOR inhibitors such as everolimus and sirolimus treat subependymal giant cell astrocytoma and renal angiomyolipoma. Large angiomyolipomas may be embolised to avoid removing the kidney.

Sources

  1. StatPearls — Klippel-Trenaunay-Weber Syndrome (NBK558989)
  2. StatPearls — Neurofibromatosis Type 1 (NCBI Bookshelf)
  3. StatPearls — Neurofibromatosis Type 2 (NCBI Bookshelf)
  4. StatPearls — Tuberous Sclerosis Complex (NCBI Bookshelf)
  5. StatPearls — Sturge-Weber Syndrome (NCBI Bookshelf)
  6. GeneReviews — Von Hippel-Lindau Syndrome (NCBI Bookshelf)
  7. DermNet — Tuberous sclerosis
  8. DermNet — Angiofibroma
  9. Clinical and molecular analysis of 73 children with tuberous sclerosis complex (PMC)

For exam preparation and education only — not a substitute for clinical judgement or local guidelines. How we write and review these pages: editorial policy.

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