Pulmonary Embolism — Wells Score, S1Q3T3, CTPA and Management

Written & medically reviewed by the Kinase Medical Team · Last reviewed

Quick Answer

Pulmonary embolism is obstruction of the pulmonary arteries, usually by a clot from a lower-limb deep vein thrombosis. Estimate probability with the Wells score, use D-dimer when probability is low or moderate, and confirm with CT pulmonary angiography. The ECG classically shows S1Q3T3, though sinus tachycardia is commonest. Anticoagulate; thrombolyse if haemodynamically unstable.

What is pulmonary embolism and who gets it?

Acute pulmonary embolism (PE) occurs when a blood clot that formed elsewhere blocks the pulmonary arteries. Most emboli start as a deep vein thrombosis (DVT) of the lower limb; PE and DVT together make up venous thromboembolism (VTE). Rarely the embolus is air, fat or tumour cells. Because the symptoms (dyspnoea, chest pain, syncope) overlap with many cardiac and respiratory diseases, PE is easy to miss, which is why exams test the scoring and diagnostic pathway more than the textbook description.

Risk factors follow Virchow's triad — hypercoagulability, venous stasis and endothelial injury (see Virchow's triad). Genetic causes include factor V Leiden, prothrombin gene mutation, protein C or S deficiency and hyperhomocysteinaemia. Acquired causes include bed rest of more than 3 days, travel of more than 4 hours, recent orthopaedic surgery, malignancy, central venous catheters, pregnancy and the postpartum period, oral contraceptives, hormone replacement, smoking and obesity. Pancreatic, haematological, lung, gastric and brain cancers carry the highest VTE risk.

Pulmonary Embolism Remastered - Pathophysiology, Symptoms, Diagnosis, DVTTen-minute lecture on how a DVT embolises, why hypoxia and right-heart strain follow, and how the diagnosis is approached.Video: MedCram - Medical Lectures Explained CLEARLY · 10:44 · Watch on YouTube · Loads from YouTube (privacy-enhanced mode) only when you press play.
Pulmonary Embolism - OverviewFour-minute hand-drawn overview of causes, features and treatment for a quick revision pass.Video: Armando Hasudungan · 4:04 · Watch on YouTube · Loads from YouTube (privacy-enhanced mode) only when you press play.

Why does PE cause hypoxia and right heart failure?

Emboli are usually multiple, more often in the lower lobes, and bilateral involvement is common. A large embolus lodges at the main pulmonary artery bifurcation as a saddle embolus; smaller peripheral emboli can cause pulmonary infarction (intra-alveolar haemorrhage). Obstruction leaves ventilation unchanged but reduces perfusion, creating dead-space ventilation and a V/Q mismatch with hypoxaemia. Mediators such as serotonin add vasospasm, and inflammatory mediators stimulate respiratory drive, so many patients hyperventilate and develop hypocapnia with respiratory alkalosis.

The haemodynamic effect decides the outcome. Pulmonary vascular resistance rises from mechanical obstruction plus hypoxic vasoconstriction; pulmonary artery pressure climbs once more than 30–50% of the pulmonary arterial bed is occluded. The right ventricle dilates against the raised afterload, the septum bows into the left ventricle, left ventricular filling falls, cardiac output drops and the patient becomes hypotensive. Acute right ventricular failure is the primary cause of death in severe PE.

  • Symptoms: dyspnoea, pleuritic chest pain, cough, haemoptysis, syncope — all non-specific.
  • Signs: tachypnoea and tachycardia (common but non-specific), calf swelling or tenderness, raised JVP, a loud P2, right-sided gallop, right ventricular parasternal heave.
  • Sudden collapse: PE is a recognised cause of sudden cardiac arrest (about 8%).
  • Chronic sequel: persistent dyspnoea in the first 3 months to 2 years should prompt a search for chronic thromboembolic pulmonary hypertension (CTEPH), which affects up to 5% of patients.

How is the Wells score calculated, and what is PERC?

The Wells score converts bedside findings into a pre-test probability so you can choose the right test. It is the most examined number in PE.

Wells criteria for pulmonary embolism
CriterionPoints
Clinical signs or symptoms of DVT3
PE is the most likely diagnosis (other diagnoses less likely)3
Heart rate more than 100 per minute1.5
Immobilisation for 3 days or more, or surgery in the previous 4 weeks1.5
Previous DVT or PE1.5
Haemoptysis1
Malignancy1
Interpreting the total
VersionCategoryScore
Traditional (three-tier)LowLess than 2
Traditional (three-tier)Moderate2 to 6
Traditional (three-tier)HighMore than 6
Modified (two-tier)PE unlikely4 or less
Modified (two-tier)PE likelyMore than 4

PERC (Pulmonary Embolism Rule-out Criteria) is used in the emergency department for patients whose clinical suspicion is already low. If all eight are met, the likelihood of PE is low enough that no further testing is needed: age under 50, heart rate under 100, oxygen saturation of 95% or more, no haemoptysis, no oestrogen use, no prior DVT/PE, no unilateral leg swelling, and no surgery or trauma needing hospitalisation in the last 4 weeks.

Which investigations are used in PE, and what do they show?

Investigations at a glance
TestKey point for exams
D-dimerHigh sensitivity (quantitative ELISA at least 95%), low specificity. Cut-off 500 ng/mL; negative with low or intermediate probability excludes PE. Raised by pregnancy, trauma, malignancy, surgery, liver disease and age. Use an age-adjusted cut-off above 50 years.
ECGMost common: sinus tachycardia and non-specific ST-T changes. Classic but uncommon: S1Q3T3, right ventricular strain, new incomplete RBBB.
Chest X-rayUsually normal or non-specific (atelectasis, effusion). Hampton hump (peripheral wedge-shaped opacity), Westermark sign (focal oligaemia) and Fleischer sign (prominent pulmonary artery) are specific but insensitive.
CTPAInvestigation of choice. PIOPED II: sensitivity 83%, specificity 96%. Relatively contraindicated in severe contrast allergy or eGFR below 30.
V/Q scanUsed when CTPA is contraindicated or inconclusive. Test of choice in pregnancy if the chest X-ray is normal. Normal scan excludes PE.
EchocardiographyRV dilation in 25% or more of PE patients; useful for risk stratification and as a bedside test in unstable patients.
Compression ultrasoundOver 90% sensitive and about 95% specific for proximal symptomatic DVT; a proximal DVT in suspected PE is enough to start anticoagulation.
Two CT pulmonary angiogram slices, coronal above and axial below, showing contrast-filled pulmonary arteries with a dark filling defect where the clot lies.
CT pulmonary angiography: a clot appears as a filling defect (dark) within the bright contrast-filled pulmonary artery. This is why CTPA is the diagnostic modality of choice.Image: Aung Myat and Arif Ahsan, CC BY 2.0

Biomarkers help prognosis, not diagnosis. Troponin is raised in 30–50% of moderate to large PE and predicts deterioration; BNP and NT-proBNP rise with right ventricular dysfunction. Neither confirms or excludes PE.

What is the diagnostic pathway for suspected PE?

Choose the next step from the pre-test probability and the patient's haemodynamic state.

Pathway by Wells category
SituationNext step
Low probability (Wells under 2), PERC all metStop. PE is excluded without further testing.
Low probability, PERC not metD-dimer. Below 500 ng/mL (or the age-adjusted value) rules out PE; if positive, CTPA.
High probability (Wells over 6), stableStart anticoagulation before imaging, then emergent CTPA.
CTPA inconclusive or contraindicatedV/Q scan. Normal excludes PE; high probability diagnoses it; intermediate leads to compression ultrasound of the legs.
Unstable and too sick to scanBedside echocardiography or leg compression ultrasound; if RV strain with high suspicion, treat as PE.
  • Pregnancy and PE: V/Q scan is preferred when the chest X-ray is normal.
  • Renal failure or contrast anaphylaxis: V/Q scan.
  • Abnormal chest X-ray: V/Q results become unreliable, so go to CTPA.
  • MR angiography: not first-line (low sensitivity, availability, many inconclusive scans).

How is PE risk-stratified?

First classify by haemodynamics. Haemodynamically unstable PE (formerly 'massive') means systolic BP under 90 mmHg, a fall of 40 mmHg or more from baseline, or hypotension needing vasopressors. 'Massive' refers to the effect, not the clot size. Stable PE ranges from small, low-risk emboli to intermediate-risk (submassive) PE, which causes right ventricular dysfunction without hypotension.

The PESI and simplified PESI (sPESI) predict 30-day mortality and identify patients who can be treated as outpatients. sPESI scores 1 point each for age over 80, cancer, chronic heart failure or lung disease, pulse of 110 or more, systolic BP under 100 and oxygen saturation under 90%.

PESI classes and sPESI
Score30-day mortalityDisposition
PESI class I (65 or less)1% to 6%Low risk, outpatient candidate
PESI class II (66 to 85)1.7% to 3.5%Low risk, outpatient candidate
PESI class III (86 to 105)3.2% to 7.1%Moderate, closer monitoring
PESI class IV (106 to 125)4% to 11.4%High risk
PESI class V (over 125)10% to 24.5%High risk
sPESI 0 points1.0%Low risk
sPESI 1 or more points10.9%Higher risk

How is pulmonary embolism treated?

Anticoagulation is the mainstay of treatment. For suspected PE it is started before imaging in stable patients with high clinical suspicion, and also in intermediate suspicion if imaging will be delayed. In low suspicion, wait for imaging if it can be done within 24 hours.

  • Choice of anticoagulant: LMWH or fondaparinux are preferred (less major bleeding and less heparin-induced thrombocytopaenia). Unfractionated heparin is used in haemodynamic instability, when reperfusion may be needed, and in renal impairment. Oral options are DOACs or vitamin K antagonists. See heparin, warfarin and DOACs.
  • Unstable PE: primary reperfusion, usually systemic thrombolysis. Be cautious with large volumes of IV fluid: aggressive resuscitation can over-distend the failing right ventricle and reduce output.
  • Thrombolysis timing: preferred within 48 hours of symptom onset, still beneficial up to 14 days. The PEITHO trial showed fewer haemodynamic collapses in stable intermediate-risk PE but more major bleeding.
  • Absolute contraindications to thrombolysis: prior intracranial haemorrhage, known structural intracranial vascular disease or malignant intracranial tumour, ischaemic stroke within 3 months, suspected aortic dissection, active bleeding or bleeding diathesis, recent brain or spinal surgery, recent significant head or facial trauma.
  • If thrombolysis is contraindicated or fails: catheter-directed therapy (up to about 87% success in studies) or surgical pulmonary embolectomy.
  • IVC filter: only for VTE with an absolute contraindication to anticoagulation, or recurrent VTE despite anticoagulation. Use a retrievable filter and anticoagulate once safe.
Duration of anticoagulation
ScenarioDuration
Any PEAt least 3 months
Provoked by a transient risk factor3 months is usually enough
Unprovoked or persisting risk factorLonger, reassessed at 3 months against bleeding risk

Frequently asked questions

What is the first-line investigation for suspected pulmonary embolism?
CT pulmonary angiography (CTPA) is the diagnostic modality of choice and visualises the arteries down to the subsegmental level. Choose it after estimating probability with the Wells score. A V/Q scan replaces it in pregnancy with a normal chest X-ray, in contrast allergy, and in severe renal failure.
What is the Wells score cut-off for PE?
In the traditional three-tier version, below 2 is low, 2 to 6 is moderate and above 6 is high probability. In the modified two-tier version, a score above 4 means PE is likely and 4 or less means PE is unlikely. The highest-weighted items are DVT signs and 'PE most likely', 3 points each.
What does S1Q3T3 mean on an ECG?
It is a prominent S wave in lead I, a Q wave in lead III and an inverted T wave in lead III, reflecting acute right ventricular strain. It is classic for pulmonary embolism but uncommon; sinus tachycardia and non-specific ST-T changes are more frequent, and S1Q3T3 can occur without a central clot.
When can D-dimer be used to rule out PE?
D-dimer is useful when pre-test probability is low or intermediate. A level below 500 ng/mL, or below the age-adjusted cut-off in patients over 50, effectively excludes PE. It has low specificity, so a positive result needs imaging. It should not be used to rule out PE when probability is high.
What is the treatment of haemodynamically unstable PE?
Unstable PE (systolic BP under 90 mmHg or a drop of 40 mmHg or more) needs primary reperfusion, usually systemic thrombolysis, with unfractionated heparin for anticoagulation. If thrombolysis is contraindicated or fails, use catheter-directed therapy or surgical embolectomy. Avoid large fluid loads that overdistend the right ventricle.
How long should anticoagulation continue after PE?
Every patient with PE needs at least 3 months of anticoagulation. After a PE provoked by a transient risk factor, 3 months is usually sufficient. For unprovoked PE or persistent risk factors, longer treatment is considered and reviewed at 3 months by weighing recurrence against bleeding risk.
What are the criteria for an IVC filter?
An inferior vena cava filter is indicated in venous thromboembolism when anticoagulation is absolutely contraindicated, or when VTE recurs despite adequate anticoagulation. Retrievable filters are preferred so that the filter can be removed once the contraindication resolves and anticoagulation is started.
Which X-ray signs are described in pulmonary embolism?
The Hampton hump is a peripheral wedge-shaped opacity from pulmonary infarction, the Westermark sign is focal oligaemia with increased lucency, and the Fleischer sign is a prominent pulmonary artery. They are specific but insensitive; the chest X-ray is often normal and mainly helps exclude other causes of dyspnoea.

Sources

  1. StatPearls — Acute Pulmonary Embolism (NCBI Bookshelf, updated Dec 2024)
  2. StatPearls — D-Dimer Test (NCBI Bookshelf)
  3. Gerlt D et al. S1Q3T3 Pattern in Lemierre Syndrome. JACC Case Reports 2026 (PMC13326214)

For exam preparation and education only — not a substitute for clinical judgement or local guidelines. How we write and review these pages: editorial policy.

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