Vitamin Deficiencies — Fat- and Water-Soluble Vitamins, Classic Signs, Key Tests and Treatment

Written & medically reviewed by the Kinase Medical Team · Last reviewed

Quick Answer

Fat-soluble vitamins A, D, E and K are lost in fat malabsorption: night blindness, rickets, ataxia and bleeding. Water-soluble B and C deficiencies cause beriberi and Wernicke (B1), pellagra (B3), megaloblastic anaemia (B9, B12, with neuropathy only in B12) and scurvy (C). Newborns need 1 mg intramuscular vitamin K at birth.

Which vitamin deficiency causes which disease?

Vitamins are grouped by solubility. The fat-soluble vitamins — A, D, E, K — need bile and pancreatic enzymes for absorption, so they fail together in cholestasis, pancreatic insufficiency, cystic fibrosis, short bowel and bariatric surgery. The water-soluble vitamins — the B group and C — are stored poorly (B12 is the exception, with large hepatic stores), so deficiency appears quickly when intake or absorption falls.

Master table — fat-soluble vitamins
VitaminDeficiency diseaseKey signsKey testTreatment / prevention
A (retinol)XerophthalmiaNight blindness, Bitot spots, corneal xerosis → keratomalacia; frequent infectionsSerum retinolHigh-dose oral vitamin A (WHO schedule)
D (cholecalciferol)Rickets (children), osteomalacia (adults)Bone pain, myalgia, weakness, fractures; secondary hyperparathyroidismSerum 25-hydroxyvitamin DVitamin D3 (preferred over D2)
E (α-tocopherol)Neuromuscular syndromeAtaxia, hyporeflexia, loss of vibration sense, limited upward gaze, retinopathySerum α-tocopherol (< 5 µg/mL)Oral vitamin E; treat malabsorption
K (phylloquinone)Vitamin K deficiency bleedingBruising, umbilical/GI bleeding, intracranial haemorrhage in infantsProlonged PT, raised PIVKA-IIVitamin K1 1 mg IM at birth; IM/SC vitamin K to treat
Master table — water-soluble vitamins
VitaminDeficiency diseaseKey signsKey testTreatment
B1 (thiamine)Beriberi, Wernicke–KorsakoffDry: neuropathy; wet: high-output heart failure; Wernicke triadMainly clinical — treat on suspicionIV thiamine before glucose
B2 (riboflavin)AriboflavinosisCheilosis, angular stomatitis, glossitis, seborrhoeic dermatitis, anaemiaEGRac ≥ 1.40Oral riboflavin
B3 (niacin)PellagraDermatitis, diarrhoea, dementia → deathUrinary N1-methylnicotinamide; therapeutic responseNicotinamide 250–500 mg/day
B6 (pyridoxine)Pyridoxine deficiencyCheilosis, glossitis, seborrhoeic dermatitis, microcytic anaemia, seizures, neuropathyPlasma PLP (< 20 nmol/L insufficient)Pyridoxine; prophylaxis with isoniazid
B7 (biotin)Biotin deficiencyAlopecia, periorificial dermatitis, hypotonia, seizuresUrinary 3-hydroxyisovaleric acidBiotin 5–10 mg/day
B9 (folate)Megaloblastic anaemia; neural tube defectsAnaemia, glossitis — no neuropathySerum folate < 2 ng/mL; ↑ homocysteine, normal MMAFolic acid 1–5 mg/day
B12 (cobalamin)Megaloblastic anaemia, SACDAnaemia plus neuropathy, ataxia, loss of proprioception, dementiaB12 < 200 pg/mL; ↑ MMA and homocysteineIM B12 1000 µg
C (ascorbic acid)ScurvyCorkscrew hairs, perifollicular haemorrhages, bleeding gums, subperiosteal bleedsLeukocyte vitamin C; clinicalVitamin C 500–1000 mg/day (adults)
Nutrition: Introduction to Vitamins – Genetics | LecturioLecturio introduction to vitamins — fat- versus water-soluble groups, absorption and why deficiency patterns differ.Video: Lecturio Medical · 7:57 · Watch on YouTube · Loads from YouTube (privacy-enhanced mode) only when you press play.

What are the features of vitamin A deficiency?

Chronic vitamin A deficiency presents first with night blindness (nyctalopia) and more frequent gastrointestinal, respiratory and urinary infections. As it progresses, xerophthalmia develops: conjunctival xerosis, Bitot spots (triangular or oval, foamy conjunctival lesions), corneal xerosis, ulceration and finally keratomalacia — corneal softening and necrosis. Measles can drop serum retinol by more than 30% and cause acute corneal ulceration without preceding night blindness. Serum retinol is the most widely used test. Staging is covered in xerophthalmia.

Black-and-white close-up of an eye showing a foamy, irregular whitish patch on the temporal bulbar conjunctiva beside the cornea.
Bitot spot — a foamy, triangular conjunctival lesion caused by vitamin A deficiency.Image: CDC / Nutrition Program, Public domain
WHO high-dose oral vitamin A schedules (StatPearls)
PurposeAgeDose
Treatment of xerophthalmia (days 1, 2 and 15)< 6 months50,000 IU per dose
6–12 months100,000 IU per dose
> 12 months and adults200,000 IU per dose
Prevention (supplementation programmes)6–11 months100,000 IU once
12 months – 5 years200,000 IU every 4–6 months

What do vitamin D, E and K deficiencies look like?

Vitamin D: low vitamin D reduces calcium and phosphate absorption; the low calcium drives secondary hyperparathyroidism, phosphaturia and bone loss — rickets in children and osteomalacia in adults (full detail in rickets). Most patients are asymptomatic; severe deficiency causes bone pain, myalgia, fasciculations and weakness. Measure serum 25-hydroxyvitamin D (the storage form) — StatPearls describes < 20 ng/mL as deficiency and 20–30 ng/mL as insufficiency, while noting that cut-offs vary between societies. Vitamin D3 is preferred to D2 for correction.

Vitamin E deficiency is rare from diet alone and usually reflects fat malabsorption (cystic fibrosis, cholestasis, short bowel), abetalipoproteinaemia, isolated vitamin E deficiency (tocopherol transfer protein defect) or prematurity (little crosses the placenta). It is a neurological disease: ataxia (the commonest finding), hyporeflexia, loss of vibration sense, limited upward gaze and, in abetalipoproteinaemia, pigmented retinopathy — a picture that mimics Friedreich ataxia.

Why do newborns need vitamin K and what is VKDB?

Nearly all newborns are vitamin K deficient: poor placental transfer, immature hepatic synthesis of clotting factors, a sterile gut without vitamin K-producing bacteria, and low vitamin K in breast milk. Vitamin K is the cofactor for γ-glutamyl carboxylase, which activates factors II, VII, IX and X and proteins C, S and Z; without it, inactive 'PIVKA' proteins accumulate.

Vitamin K deficiency bleeding (VKDB) in infants (StatPearls)
TypeTimingTypical causeTypical bleeding
EarlyWithin 24 hoursMaternal drugs — anticonvulsants (phenytoin, carbamazepine, phenobarbital), rifampicin, isoniazid, warfarinOften severe: intracranial, intrathoracic, intra-abdominal
ClassicDay 2 to 1 weekExclusive breastfeeding without prophylaxisSkin, umbilical, GI, post-circumcision
Late1 week – 6 months (peak 2–8 weeks)Exclusive breastfeeding without prophylaxis; cholestasis (biliary atresia), malabsorptionIntracranial haemorrhage in a high proportion
  • Prophylaxis (AAP): vitamin K1 (phytonadione) 1 mg IM within 6 hours of birth for infants > 1500 g; 0.3–0.5 mg/kg IM for infants ≤ 1500 g. IM is preferred — oral regimens are less effective against late VKDB
  • Labs: prolonged PT (± aPTT) with normal platelets and fibrinogen; raised PIVKA-II; PT corrects within 2–4 hours of vitamin K
  • Treatment: vitamin K1 1 mg IM or SC; fresh frozen plasma 10–15 mL/kg or prothrombin complex concentrate for severe bleeding such as intracranial haemorrhage
Vitamin K: Fat Soluble Vitamin | BiochemistryLecturio biochemistry of vitamin K — γ-carboxylation of clotting factors, the vitamin K cycle, warfarin and deficiency states.Video: Lecturio Medical · 9:53 · Watch on YouTube · Loads from YouTube (privacy-enhanced mode) only when you press play.

What are beriberi and Wernicke encephalopathy?

Thiamine pyrophosphate is the coenzyme for pyruvate dehydrogenase, α-ketoglutarate dehydrogenase and transketolase. Deficiency starves high-energy tissues — nerves, heart and brain. Dry beriberi = symmetrical peripheral neuropathy; wet beriberi = high-output heart failure with oedema, a medical emergency that can kill within days.

Wernicke encephalopathy is the acute neurological form: the classic triad of ophthalmoparesis (often with nystagmus), gait ataxia and mental status change. Only about 16% show all three and about 19% show none at first, so suspect it in any malnourished or alcohol-dependent patient — and remember it also occurs without alcohol use. Lesions involve the mammillary bodies, medial thalami and periaqueductal grey. Untreated, it progresses to Korsakoff syndrome — anterograde amnesia with confabulation.

Wernicke Korsakoff Syndrome (Year of the Zebra)Osmosis short on Wernicke–Korsakoff syndrome — thiamine deficiency, the classic triad, mammillary body involvement and amnesia with confabulation.Video: Osmosis from Elsevier · 3:33 · Watch on YouTube · Loads from YouTube (privacy-enhanced mode) only when you press play.

What are the signs of riboflavin and niacin (pellagra) deficiency?

Riboflavin (B2) forms FMN and FAD. Severe deficiency (ariboflavinosis) causes cheilosis, angular stomatitis, glossitis, seborrhoeic dermatitis and anaemia; it also impairs activation of niacin and pyridoxine. Neonatal phototherapy degrades the light-sensitive vitamin. The functional test is the erythrocyte glutathione reductase activation coefficient (EGRac) — ≥ 1.40 indicates deficiency.

Niacin (B3) forms NAD and NADP, and can also be made from tryptophan. Deficiency causes pellagra — the classic '3 Ds': dermatitis, diarrhoea and dementia, with death as the fourth D. The dermatitis is a symmetrical, burning, sunburn-like eruption on sun-exposed skin (dorsum of hands and feet, neck, malar area); the tongue is beefy red; neuropsychiatric change runs from apathy and depression to delirium.

Causes of pellagra to remember (StatPearls)
CauseMechanism
Maize (corn)-based dietNiacin in corn is bound and poorly bioavailable
Hartnup diseaseImpaired tryptophan absorption
Carcinoid syndromeTryptophan diverted to serotonin
IsoniazidReduces B6-dependent conversion of tryptophan to niacin
5-fluorouracil, 6-mercaptopurine, azathioprineInhibit conversion of tryptophan to niacin
Chronic alcohol use, malabsorptionPoor intake and absorption

What do pyridoxine and biotin deficiencies cause?

Pyridoxine (B6) — active form pyridoxal 5′-phosphate — is a cofactor in over 100 reactions, including transamination and the first step of haem (porphyrin) synthesis. Deficiency causes stomatitis, glossitis, cheilosis, irritability, peripheral neuropathy, seborrhoeic dermatitis, microcytic anaemia and seizures. Isoniazid competitively inhibits pyridoxine, so patients on INH are supplemented; penicillamine, levodopa and some anticonvulsants also interfere.

  • Pyridoxine-dependent seizures in neonates do not respond to usual anticonvulsants — give pyridoxine 100 mg IV
  • Isoniazid overdose seizures: pyridoxine in a dose equal to the INH ingested (up to 5 g) is life-saving
  • Toxicity: chronic high doses (usually > 250 mg/day) cause sensory neuropathy that may be irreversible — B6 is one of the few toxic water-soluble vitamins

Biotin (B7) is the cofactor for the carboxylases — pyruvate, acetyl-CoA, propionyl-CoA and 3-methylcrotonyl-CoA carboxylase. Deficiency causes alopecia, a scaly periorificial dermatitis, conjunctivitis, hypotonia and seizures, with lactic acidosis and organic aciduria. Classic causes are excess raw egg white (avidin binds biotin), long-term anticonvulsants or antibiotics, biotin-free parenteral nutrition, and inherited biotinidase or holocarboxylase synthetase deficiency. The best marker is raised urinary 3-hydroxyisovaleric acid.

How do you tell folate from vitamin B12 deficiency?

Both cause megaloblastic anaemia — MCV > 100 fL with hypersegmented neutrophils — because both are needed for DNA synthesis. B12 is the cofactor for methionine synthase (homocysteine → methionine) and methylmalonyl-CoA mutase (methylmalonyl-CoA → succinyl-CoA). B12 deficiency also traps folate as methyl-THF (the folate trap). See megaloblastic anaemia.

Folate vs B12 deficiency
FeatureFolate (B9)Cobalamin (B12)
NeurologyAbsent (mood change possible)Present — SACD: dorsal columns, lateral corticospinal and spinocerebellar tracts; neuropathy, dementia
HomocysteineRaisedRaised
Methylmalonic acidNormalRaised
OnsetWeeks (stores ~8–16 weeks)Years (large liver stores; ~3 years of strict vegan diet)
CausesPoor diet, alcohol, pregnancy, haemolysis, methotrexate, phenytoin, trimethoprim, spruePernicious anaemia, gastrectomy/bariatric surgery, ileal resection, Crohn, D. latum, vegan diet, metformin, nitrous oxide
TreatmentFolic acid 1–5 mg/day orally1000 µg IM weekly × 4, then monthly (oral high-dose also works)
Peripheral blood film showing a large neutrophil with a nucleus divided into six or more lobes, surrounded by red cells.
Hypersegmented neutrophil — a neutrophil with many nuclear lobes, the blood-film clue to megaloblastic anaemia from B12 or folate deficiency.Image: Ed Uthman, CC BY 2.0

What are the signs of scurvy?

Vitamin C is the cofactor for prolyl and lysyl hydroxylases, which stabilise collagen. Without it, vessels, skin, gums and bone become fragile. Humans cannot synthesise ascorbic acid (they lack L-gulonolactone oxidase). Non-specific symptoms appear 4–12 weeks after intake stops; risk groups include alcohol use, 'tea and toast' diets in older adults, infants fed cow's milk instead of breast milk or formula, smokers and dialysis patients.

  • Skin: corkscrew hairs (considered pathognomonic), swan-neck hairs, perifollicular haemorrhages on the legs, petechiae, ecchymoses, poor wound healing
  • Gums: swollen, bleeding gingivae, periodontal disease, loss of teeth
  • Bone and joint: subperiosteal haematomas, haemarthroses, painful limp or refusal to bear weight in children (knee most often)
  • Scorbutic rosary: tender, angular costochondral swellings — unlike the rounded, non-tender rachitic rosary
Close-up of a patient's mouth with the lower lip pulled down, showing swollen, dark, haemorrhagic gums between the teeth.
Scorbutic gums — swollen, bleeding gingivae from defective collagen in vitamin C deficiency.Image: Centers for Disease Control and Prevention, Public domain

Diagnosis is clinical, supported by a rapid response to vitamin C. Plasma levels reflect recent intake; leukocyte vitamin C is a better measure of stores. Treat with 500–1000 mg/day in adults (up to 300 mg/day in children) for 1–3 months; fatigue improves within 24 hours, bleeding within 1–2 weeks, and corkscrew hairs within a month.

Frequently asked questions

Which vitamin deficiency causes night blindness?
Vitamin A deficiency causes night blindness, the typical presenting symptom of chronic deficiency. As deficiency progresses it produces conjunctival xerosis, Bitot spots, corneal xerosis, ulceration and keratomalacia. Serum retinol is the usual test, and WHO treats xerophthalmia with high-dose oral vitamin A on days 1, 2 and 15, with the dose set by age.
What are the 3 Ds of pellagra?
Pellagra, caused by niacin (vitamin B3) deficiency, presents with dermatitis on sun-exposed skin, diarrhoea and dementia; untreated it ends in death, the fourth D. Causes include maize-based diets, alcohol use, Hartnup disease, carcinoid syndrome and drugs such as isoniazid. Treatment is nicotinamide 250 to 500 mg daily.
What is the classic triad of Wernicke encephalopathy?
The triad is ophthalmoparesis, often with nystagmus, gait ataxia and confusion or other mental status change. Only about 16 percent of patients show all three, so the diagnosis must be suspected clinically in at-risk patients. Thiamine should be given intravenously in high doses and before or with any glucose infusion.
How do you distinguish vitamin B12 from folate deficiency?
Both cause megaloblastic anaemia with hypersegmented neutrophils and raised homocysteine. Methylmalonic acid is raised only in B12 deficiency, and neurological features such as subacute combined degeneration, neuropathy and dementia occur with B12 but not folate deficiency. Replace B12 before or with folic acid to avoid worsening neurological damage.
What is the dose of vitamin K given to newborns?
The American Academy of Pediatrics recommends 1 mg of vitamin K1 (phytonadione) intramuscularly within 6 hours of birth for infants above 1500 g, and 0.3 to 0.5 mg/kg intramuscularly for infants of 1500 g or less. Intramuscular prophylaxis prevents nearly all early, classic and late vitamin K deficiency bleeding.
What are the signs of scurvy?
Scurvy from vitamin C deficiency causes corkscrew hairs, perifollicular haemorrhages, easy bruising, swollen bleeding gums, poor wound healing, subperiosteal haemorrhage and painful joints. Children may limp or refuse to walk, and a tender angular scorbutic rosary can form at the costochondral junctions. It responds quickly to vitamin C 500 to 1000 mg daily.
Which vitamin deficiency causes ataxia similar to Friedreich ataxia?
Vitamin E deficiency causes a spinocerebellar syndrome with ataxia, hyporeflexia, loss of vibration sense and limited upward gaze, resembling Friedreich ataxia. It usually results from fat malabsorption, cystic fibrosis, cholestasis, abetalipoproteinaemia or an inherited defect of tocopherol transfer protein. Serum alpha-tocopherol is low and oral vitamin E is the treatment.
Why is pyridoxine given with isoniazid?
Isoniazid competitively inhibits pyridoxine (vitamin B6), and deficiency causes peripheral neuropathy, glossitis, cheilosis, anaemia and seizures. Prophylactic pyridoxine is therefore given to patients on isoniazid. In isoniazid overdose, intravenous pyridoxine in a dose equal to the isoniazid ingested, up to 5 g, is the antidote for refractory seizures.

Sources

  1. StatPearls — Vitamin A Deficiency (NCBI Bookshelf)
  2. StatPearls — Vitamin D Deficiency (NCBI Bookshelf)
  3. StatPearls — Vitamin E Deficiency (NCBI Bookshelf)
  4. StatPearls — Vitamin K Deficiency in Neonates and Adults (NCBI Bookshelf, updated 2026)
  5. StatPearls — Vitamin B1 (Thiamine) Deficiency (NCBI Bookshelf)
  6. StatPearls — Wernicke-Korsakoff Syndrome (NCBI Bookshelf)
  7. StatPearls — Riboflavin Deficiency (NCBI Bookshelf)
  8. StatPearls — Niacin Deficiency (NCBI Bookshelf)
  9. StatPearls — Vitamin B6 Deficiency (NCBI Bookshelf)
  10. StatPearls — Biotin Deficiency (NCBI Bookshelf)
  11. StatPearls — Folic Acid Deficiency (NCBI Bookshelf)
  12. StatPearls — Vitamin B12 Deficiency (NCBI Bookshelf)
  13. StatPearls — Vitamin C Deficiency (NCBI Bookshelf)

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